COG0830


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0830, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Urease accessory protein UreF
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG0830 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1159 FBDBKF_06645 169838 170524 -1 ureF Urease accessory protein UreF Morganella morganii S1
1 group_1159 EHELCC_09690 170410 171096 -1 ureF Urease accessory protein UreF Morganella morganii S2
2 group_1159 NLDBIP_10070 170410 171096 -1 ureF Urease accessory protein UreF Morganella morganii S4
3 group_1159 LHKJJB_07685 46142 46828 1 ureF Urease accessory protein UreF Morganella morganii S3
4 group_1159 HKOGLL_07235 46142 46828 1 ureF Urease accessory protein UreF Morganella morganii S5
5 group_1159 F4V73_RS15290 43797 44483 1 urease accessory protein UreF Morganella psychrotolerans
6 group_1159 PMI_RS18345 4027619 4028287 1 urease accessory protein UreF Proteus mirabilis HI4320