COG0817


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0817, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Holliday junction resolvasome RuvABC endonuclease subunit RuvC
Function(s) descr. Replication, recombination and repair (L)

Occurence in the database

COG0817 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_634 FBDBKF_02055 99796 100320 1 ruvC crossover junction endodeoxyribonuclease RuvC Morganella morganii S1
1 group_634 EHELCC_02525 487616 488140 1 ruvC crossover junction endodeoxyribonuclease RuvC Morganella morganii S2
2 group_634 NLDBIP_00935 191996 192520 -1 ruvC crossover junction endodeoxyribonuclease RuvC Morganella morganii S4
3 group_634 LHKJJB_01100 200165 200689 1 ruvC crossover junction endodeoxyribonuclease RuvC Morganella morganii S3
4 group_634 HKOGLL_01140 205676 206200 1 ruvC crossover junction endodeoxyribonuclease RuvC Morganella morganii S5
5 group_634 F4V73_RS04420 935624 936148 1 ruvC crossover junction endodeoxyribonuclease RuvC Morganella psychrotolerans
6 group_634 PMI_RS05405 1182894 1183415 1 ruvC crossover junction endodeoxyribonuclease RuvC Proteus mirabilis HI4320