COG0773


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0773, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG0773 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_856 FBDBKF_04330 54058 55479 -1 murC UDP-N-acetylmuramate--L-alanine ligase Morganella morganii S1
1 group_1387 FBDBKF_08565 95680 97032 1 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase Morganella morganii S1
2 group_856 EHELCC_05620 113515 114936 -1 murC UDP-N-acetylmuramate--L-alanine ligase Morganella morganii S2
3 group_1387 EHELCC_12960 66693 68045 -1 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase Morganella morganii S2
4 group_856 NLDBIP_05940 154580 156001 -1 murC UDP-N-acetylmuramate--L-alanine ligase Morganella morganii S4
5 group_1387 NLDBIP_13300 66693 68045 -1 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase Morganella morganii S4
6 group_856 LHKJJB_02820 132104 133525 -1 murC UDP-N-acetylmuramate--L-alanine ligase Morganella morganii S3
7 group_1387 LHKJJB_13255 94398 95750 1 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase Morganella morganii S3
8 group_856 HKOGLL_06295 53968 55389 -1 murC UDP-N-acetylmuramate--L-alanine ligase Morganella morganii S5
9 group_1387 HKOGLL_11775 66693 68045 -1 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase Morganella morganii S5
10 group_856 F4V73_RS08775 1815178 1816644 -1 murC UDP-N-acetylmuramate--L-alanine ligase Morganella psychrotolerans
11 group_1387 F4V73_RS09790 62130 63482 1 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase Morganella psychrotolerans
12 group_856 PMI_RS10195 2231761 2233224 -1 murC UDP-N-acetylmuramate--L-alanine ligase Proteus mirabilis HI4320
13 group_1387 PMI_RS16915 3725946 3727325 1 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase Proteus mirabilis HI4320