COG0728


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0728, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG0728 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_624 FBDBKF_01995 85922 87457 1 murJ murein biosynthesis integral membrane protein MurJ Morganella morganii S1
1 group_624 EHELCC_02465 473742 475277 1 murJ murein biosynthesis integral membrane protein MurJ Morganella morganii S2
2 group_624 NLDBIP_00995 204859 206394 -1 murJ murein biosynthesis integral membrane protein MurJ Morganella morganii S4
3 group_624 LHKJJB_01040 186291 187826 1 murJ murein biosynthesis integral membrane protein MurJ Morganella morganii S3
4 group_624 HKOGLL_01080 191802 193337 1 murJ murein biosynthesis integral membrane protein MurJ Morganella morganii S5
5 group_624 F4V73_RS04340 916347 917882 1 murJ murein biosynthesis integral membrane protein MurJ Morganella psychrotolerans
6 group_624 PMI_RS05340 1166917 1168452 1 murJ murein biosynthesis integral membrane protein MurJ Proteus mirabilis HI4320