COG0704


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0704, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphate uptake regulator PhoU
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG0704 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1637 FBDBKF_10770 122225 122995 1 phoU phosphate signaling complex protein PhoU Morganella morganii S1
1 group_1637 EHELCC_15105 122215 122985 1 phoU phosphate signaling complex protein PhoU Morganella morganii S2
2 group_1637 NLDBIP_14935 122215 122985 1 phoU phosphate signaling complex protein PhoU Morganella morganii S4
3 group_1637 LHKJJB_14410 18741 19511 -1 phoU phosphate signaling complex protein PhoU Morganella morganii S3
4 group_1637 HKOGLL_13030 18741 19511 -1 phoU phosphate signaling complex protein PhoU Morganella morganii S5
5 group_1637 F4V73_RS14485 126028 126810 1 phoU phosphate signaling complex protein PhoU Morganella psychrotolerans
6 group_1637 PMI_RS14320 3178065 3178799 1 phoU phosphate signaling complex protein PhoU Proteus mirabilis HI4320