COG0615


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0615, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Glycerol-3-phosphate cytidylyltransferase, cytidylyltransferase family
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG0615 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3638 FBDBKF_20625 288 758 1 tagD glycerol-3-phosphate cytidylyltransferase Morganella morganii S1
1 group_3638 EHELCC_16420 64525 64995 -1 tagD glycerol-3-phosphate cytidylyltransferase Morganella morganii S2
2 group_3638 NLDBIP_15030 294 764 -1 tagD glycerol-3-phosphate cytidylyltransferase Morganella morganii S4
3 group_3638 LHKJJB_16840 277 747 1 tagD glycerol-3-phosphate cytidylyltransferase Morganella morganii S3
4 group_3638 HKOGLL_19710 282 752 1 tagD glycerol-3-phosphate cytidylyltransferase Morganella morganii S5