COG0594


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0594, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description RNase P protein component
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG0594 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2085 FBDBKF_15595 49409 49735 1 rnpA ribonuclease P protein component Morganella morganii S1
1 group_2085 EHELCC_15955 48709 49035 1 rnpA ribonuclease P protein component Morganella morganii S2
2 group_2085 NLDBIP_16415 31628 31954 -1 rnpA ribonuclease P protein component Morganella morganii S4
3 group_2085 LHKJJB_16390 48709 49035 1 rnpA ribonuclease P protein component Morganella morganii S3
4 group_2085 HKOGLL_16160 48709 49035 1 rnpA ribonuclease P protein component Morganella morganii S5
5 group_2085 F4V73_RS17565 148271 148630 -1 rnpA ribonuclease P protein component Morganella psychrotolerans
6 group_2085 PMI_RS15490 3444577 3444936 -1 rnpA ribonuclease P protein component Proteus mirabilis HI4320