COG0573


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0573, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type phosphate transport system, permease component
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG0573 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1634 FBDBKF_10755 119558 120514 1 pstC phosphate ABC transporter permease PstC Morganella morganii S1
1 group_1634 EHELCC_15090 119548 120504 1 pstC phosphate ABC transporter permease PstC Morganella morganii S2
2 group_1634 NLDBIP_14920 119548 120504 1 pstC phosphate ABC transporter permease PstC Morganella morganii S4
3 group_1634 LHKJJB_14425 21222 22178 -1 pstC phosphate ABC transporter permease PstC Morganella morganii S3
4 group_1634 HKOGLL_13045 21222 22178 -1 pstC phosphate ABC transporter permease PstC Morganella morganii S5
5 group_1634 F4V73_RS14470 123361 124317 1 pstC phosphate ABC transporter permease PstC Morganella psychrotolerans
6 group_1634 PMI_RS14305 3175380 3176339 1 pstC phosphate ABC transporter permease PstC Proteus mirabilis HI4320