COG0549


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0549, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Carbamate kinase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0549 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1281 FBDBKF_07750 69340 70272 -1 arcC carbamate kinase Morganella morganii S1
1 group_1281 EHELCC_13580 43534 44466 -1 arcC carbamate kinase Morganella morganii S2
2 group_1281 NLDBIP_14025 64409 65341 -1 arcC carbamate kinase Morganella morganii S4
3 group_1281 LHKJJB_08825 94408 95340 1 arcC carbamate kinase Morganella morganii S3
4 group_1281 HKOGLL_08375 94408 95340 1 arcC carbamate kinase Morganella morganii S5
5 group_1281 F4V73_RS13295 287840 288775 1 arcC carbamate kinase Morganella psychrotolerans
6 group_1281 PMI_RS10835 2386834 2387739 -1 carbamate kinase Proteus mirabilis HI4320