COG0546


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0546, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphoglycolate phosphatase, HAD superfamily
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG0546 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1599 FBDBKF_10435 42871 43590 1 gph phosphoglycolate phosphatase Morganella morganii S1
1 group_1599 EHELCC_14770 42861 43580 1 gph phosphoglycolate phosphatase Morganella morganii S2
2 group_1599 NLDBIP_14600 42861 43580 1 gph phosphoglycolate phosphatase Morganella morganii S4
3 group_1599 LHKJJB_14745 98146 98865 -1 gph phosphoglycolate phosphatase Morganella morganii S3
4 group_1599 HKOGLL_13365 98146 98865 -1 gph phosphoglycolate phosphatase Morganella morganii S5
5 group_1599 F4V73_RS14130 39605 40324 1 phosphoglycolate phosphatase Morganella psychrotolerans
6 group_1599 PMI_RS14995 3327687 3328397 1 phosphoglycolate phosphatase Proteus mirabilis HI4320