COG0510


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0510, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Thiamine kinase or a related kinase
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0510 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2894 FBDBKF_12340 132015 132911 1 Choline kinase Morganella morganii S1
1 group_1955 FBDBKF_14665 32770 33612 -1 cotS Thiamine kinase or a related kinase Morganella morganii S1
2 group_2894 EHELCC_13965 1794 2690 -1 Choline kinase Morganella morganii S2
3 group_1955 EHELCC_15470 62846 63688 -1 cotS Thiamine kinase or a related kinase Morganella morganii S2
4 group_2894 NLDBIP_15060 5731 6627 -1 Choline kinase Morganella morganii S4
5 group_1955 NLDBIP_16000 62846 63688 -1 cotS Thiamine kinase or a related kinase Morganella morganii S4
6 group_2894 LHKJJB_15550 132015 132911 1 Choline kinase Morganella morganii S3
7 group_1955 LHKJJB_15840 52998 53840 1 cotS Thiamine kinase or a related kinase Morganella morganii S3
8 group_2894 HKOGLL_14670 118678 119574 1 Choline kinase Morganella morganii S5
9 group_1955 HKOGLL_14960 52210 53052 1 cotS Thiamine kinase or a related kinase Morganella morganii S5
10 group_4021 F4V73_RS04880 1037316 1038107 -1 phosphotransferase Morganella psychrotolerans
11 group_1955 F4V73_RS07460 1561412 1562254 -1 phosphotransferase Morganella psychrotolerans
12 group_2894 F4V73_RS17170 66479 67372 1 choline/ethanolamine kinase family protein Morganella psychrotolerans
13 group_1955 PMI_RS04280 959559 960470 1 phosphotransferase Proteus mirabilis HI4320