COG0473


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0473, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Isocitrate/isopropylmalate dehydrogenase
Function(s) descr. Energy production and conversion (C)
Amino acid transport and metabolism (E)

Occurence in the database

COG0473 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_870 FBDBKF_04415 76270 77361 1 leuB 3-isopropylmalate dehydrogenase Morganella morganii S1
1 group_870 EHELCC_05705 135727 136818 1 leuB 3-isopropylmalate dehydrogenase Morganella morganii S2
2 group_870 NLDBIP_06025 176792 177883 1 leuB 3-isopropylmalate dehydrogenase Morganella morganii S4
3 group_870 LHKJJB_02905 154316 155407 1 leuB 3-isopropylmalate dehydrogenase Morganella morganii S3
4 group_870 HKOGLL_06380 76180 77271 1 leuB 3-isopropylmalate dehydrogenase Morganella morganii S5
5 group_870 F4V73_RS08860 1837377 1838492 1 leuB 3-isopropylmalate dehydrogenase Morganella psychrotolerans
6 group_870 PMI_RS10270 2251961 2253052 1 leuB 3-isopropylmalate dehydrogenase Proteus mirabilis HI4320