COG0468


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0468, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description RecA/RadA recombinase
Function(s) descr. Replication, recombination and repair (L)

Occurence in the database

COG0468 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_395 FBDBKF_15235 58453 59523 1 recA recombinase RecA Morganella morganii S1
1 group_395 EHELCC_11010 25383 26453 -1 recA recombinase RecA Morganella morganii S2
2 group_395 NLDBIP_11355 25383 26453 -1 recA recombinase RecA Morganella morganii S4
3 group_395 LHKJJB_11215 25383 26453 -1 recA recombinase RecA Morganella morganii S3
4 group_395 HKOGLL_09825 25383 26453 -1 recA recombinase RecA Morganella morganii S5
5 group_395 F4V73_RS12210 24855 25925 -1 recA recombinase RecA Morganella psychrotolerans
6 group_395 F4V73_RS17985 39023 40168 -1 hypothetical protein Morganella psychrotolerans
7 group_395 PMI_RS01795 425599 426666 1 recA recombinase RecA Proteus mirabilis HI4320