COG0385


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0385, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted Na+-dependent transporter YfeH
Function(s) descr. General function prediction only (R)

Occurence in the database

COG0385 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_923 FBDBKF_05015 8598 9587 -1 yfeH putative Na+-dependent transporter YfeH Morganella morganii S1
1 group_923 EHELCC_12575 171907 172896 1 yfeH putative Na+-dependent transporter YfeH Morganella morganii S2
2 group_923 NLDBIP_12915 171862 172851 1 yfeH putative Na+-dependent transporter YfeH Morganella morganii S4
3 group_923 LHKJJB_12775 171907 172896 1 yfeH putative Na+-dependent transporter YfeH Morganella morganii S3
4 group_923 HKOGLL_11390 171907 172896 1 yfeH putative Na+-dependent transporter YfeH Morganella morganii S5
5 group_923 F4V73_RS05455 1160253 1161242 -1 bile acid:sodium symporter family protein Morganella psychrotolerans
6 group_923 PMI_RS06275 1376241 1377236 -1 bile acid:sodium symporter family protein Proteus mirabilis HI4320