COG0378


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0378, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Hydrogenase/urease maturation factor HypB, Ni2+-binding GTPase
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG0378 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1158 FBDBKF_06640 169169 169804 -1 ureG urease accessory protein UreG Morganella morganii S1
1 group_2276 FBDBKF_17495 33219 34322 -1 hypB hydrogenase nickel incorporation protein HypB Morganella morganii S1
2 group_1158 EHELCC_09685 169741 170376 -1 ureG urease accessory protein UreG Morganella morganii S2
3 group_2276 EHELCC_17390 33219 34322 -1 hypB hydrogenase nickel incorporation protein HypB Morganella morganii S2
4 group_1158 NLDBIP_10065 169741 170376 -1 ureG urease accessory protein UreG Morganella morganii S4
5 group_2276 NLDBIP_17805 8474 9577 1 hypB hydrogenase nickel incorporation protein HypB Morganella morganii S4
6 group_1158 LHKJJB_07690 46862 47497 1 ureG urease accessory protein UreG Morganella morganii S3
7 group_2276 LHKJJB_17725 8472 9575 1 hypB hydrogenase nickel incorporation protein HypB Morganella morganii S3
8 group_1158 HKOGLL_07240 46862 47497 1 ureG urease accessory protein UreG Morganella morganii S5
9 group_2276 HKOGLL_17735 8472 9575 1 hypB hydrogenase nickel incorporation protein HypB Morganella morganii S5
10 group_1158 F4V73_RS15295 44517 45155 1 ureG urease accessory protein UreG Morganella psychrotolerans
11 group_2276 F4V73_RS16670 157127 158248 -1 hypB hydrogenase nickel incorporation protein HypB Morganella psychrotolerans
12 group_2276 PMI_RS00180 59419 60615 1 hypB hydrogenase nickel incorporation protein HypB Proteus mirabilis HI4320
13 group_1158 PMI_RS18350 4028297 4028914 1 ureG urease accessory protein UreG Proteus mirabilis HI4320