COG0365


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0365, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase
Function(s) descr. Lipid transport and metabolism (I)

Occurence in the database

COG0365 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_334 FBDBKF_10485 52763 54718 1 acs acetate--CoA ligase Morganella morganii S1
1 group_334 EHELCC_14820 52753 54708 1 acs acetate--CoA ligase Morganella morganii S2
2 group_334 NLDBIP_14650 52753 54708 1 acs acetate--CoA ligase Morganella morganii S4
3 group_334 LHKJJB_14695 87018 88973 -1 acs acetate--CoA ligase Morganella morganii S3
4 group_334 HKOGLL_13315 87018 88973 -1 acs acetate--CoA ligase Morganella morganii S5
5 group_334 F4V73_RS14195 54624 56579 1 acs acetate--CoA ligase Morganella psychrotolerans
6 group_334 PMI_RS15025 3332999 3334957 1 acs acetate--CoA ligase Proteus mirabilis HI4320