COG0324


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0324, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description tRNA A37 N6-isopentenylltransferase MiaA
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG0324 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1364 FBDBKF_08450 70473 71411 1 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA Morganella morganii S1
1 group_1364 EHELCC_13075 92314 93252 -1 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA Morganella morganii S2
2 group_1364 NLDBIP_13415 92314 93252 -1 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA Morganella morganii S4
3 group_1364 LHKJJB_13140 69191 70129 1 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA Morganella morganii S3
4 group_1364 HKOGLL_11890 92314 93252 -1 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA Morganella morganii S5
5 group_1364 F4V73_RS09670 36685 37623 1 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA Morganella psychrotolerans
6 group_1364 PMI_RS16745 3691565 3692506 1 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA Proteus mirabilis HI4320