COG0244


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0244, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Ribosomal protein L10
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG0244 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2287 FBDBKF_17565 3560 4057 1 rplJ 50S ribosomal protein L10 Morganella morganii S1
1 group_2287 EHELCC_18050 2936 3433 1 rplJ 50S ribosomal protein L10 Morganella morganii S2
2 group_2287 NLDBIP_18100 35304 35801 -1 rplJ 50S ribosomal protein L10 Morganella morganii S4
3 group_2287 LHKJJB_18295 35304 35801 -1 rplJ 50S ribosomal protein L10 Morganella morganii S3
4 group_2287 HKOGLL_17905 2936 3433 1 rplJ 50S ribosomal protein L10 Morganella morganii S5
5 group_2287 F4V73_RS14950 222118 222615 1 rplJ 50S ribosomal protein L10 Morganella psychrotolerans
6 group_2287 PMI_RS13765 3062624 3063121 -1 rplJ 50S ribosomal protein L10 Proteus mirabilis HI4320