COG0193


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0193, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Peptidyl-tRNA hydrolase
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG0193 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_605 FBDBKF_01895 67103 67693 -1 pth aminoacyl-tRNA hydrolase Morganella morganii S1
1 group_605 EHELCC_02365 454923 455513 -1 pth aminoacyl-tRNA hydrolase Morganella morganii S2
2 group_605 NLDBIP_01095 224623 225213 1 pth aminoacyl-tRNA hydrolase Morganella morganii S4
3 group_605 LHKJJB_00940 167472 168062 -1 pth aminoacyl-tRNA hydrolase Morganella morganii S3
4 group_605 HKOGLL_00980 172983 173573 -1 pth aminoacyl-tRNA hydrolase Morganella morganii S5
5 group_605 F4V73_RS04240 897317 897907 -1 pth aminoacyl-tRNA hydrolase Morganella psychrotolerans
6 group_605 PMI_RS05235 1145024 1145608 -1 pth aminoacyl-tRNA hydrolase Proteus mirabilis HI4320