COG0179


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0179, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Function(s) descr. Secondary metabolites biosynthesis, transport and catabolism (Q)

Occurence in the database

COG0179 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_657 FBDBKF_02260 142133 142789 1 ycgM fumarylacetoacetate hydrolase family protein Morganella morganii S1
1 group_657 EHELCC_02730 529953 530609 1 ycgM fumarylacetoacetate hydrolase family protein Morganella morganii S2
2 group_657 NLDBIP_00730 149527 150183 -1 ycgM fumarylacetoacetate hydrolase family protein Morganella morganii S4
3 group_657 LHKJJB_01305 242502 243158 1 ycgM fumarylacetoacetate hydrolase family protein Morganella morganii S3
4 group_657 HKOGLL_01345 248013 248669 1 ycgM fumarylacetoacetate hydrolase family protein Morganella morganii S5
5 group_657 F4V73_RS04630 978913 979569 1 fumarylacetoacetate hydrolase family protein Morganella psychrotolerans
6 group_657 PMI_RS05660 1233355 1234011 1 fumarylacetoacetate hydrolase family protein Proteus mirabilis HI4320