COG0129


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0129, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Dihydroxyacid dehydratase/phosphogluconate dehydratase
Function(s) descr. Amino acid transport and metabolism (E)
Carbohydrate transport and metabolism (G)

Occurence in the database

COG0129 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1320 FBDBKF_08175 8287 10137 1 ilvD dihydroxy-acid dehydratase Morganella morganii S1
1 group_2414 FBDBKF_19500 1995 3854 -1 edd phosphogluconate dehydratase Morganella morganii S1
2 group_1320 EHELCC_13350 153588 155438 -1 ilvD dihydroxy-acid dehydratase Morganella morganii S2
3 group_2414 EHELCC_16445 1995 3854 -1 edd phosphogluconate dehydratase Morganella morganii S2
4 group_1320 NLDBIP_13690 153588 155438 -1 ilvD dihydroxy-acid dehydratase Morganella morganii S4
5 group_2414 NLDBIP_16655 1995 3854 -1 edd phosphogluconate dehydratase Morganella morganii S4
6 group_1320 LHKJJB_12865 7005 8855 1 ilvD dihydroxy-acid dehydratase Morganella morganii S3
7 group_2414 LHKJJB_16815 64656 66515 1 edd phosphogluconate dehydratase Morganella morganii S3
8 group_1320 HKOGLL_12165 153588 155438 -1 ilvD dihydroxy-acid dehydratase Morganella morganii S5
9 group_2414 HKOGLL_18800 1995 3854 -1 edd phosphogluconate dehydratase Morganella morganii S5
10 group_2414 F4V73_RS18625 70590 72425 1 edd phosphogluconate dehydratase Morganella psychrotolerans
11 group_1320 F4V73_RS18705 7245 9095 1 ilvD dihydroxy-acid dehydratase Morganella psychrotolerans
12 group_2414 PMI_RS13605 3021374 3023230 1 edd phosphogluconate dehydratase Proteus mirabilis HI4320
13 group_1320 PMI_RS16415 3618881 3620731 1 ilvD dihydroxy-acid dehydratase Proteus mirabilis HI4320