COG0128


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0128, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 5-enolpyruvylshikimate-3-phosphate synthase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0128 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1227 FBDBKF_07150 101913 103190 1 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Morganella morganii S1
1 group_1227 EHELCC_03820 82996 84273 -1 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Morganella morganii S2
2 group_1227 NLDBIP_03820 82792 84069 -1 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Morganella morganii S4
3 group_1227 LHKJJB_09650 82906 84183 -1 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Morganella morganii S3
4 group_1227 HKOGLL_09325 106869 108146 1 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Morganella morganii S5
5 group_1227 F4V73_RS01335 289751 291031 1 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Morganella psychrotolerans
6 group_1227 PMI_RS03505 781284 782570 1 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Proteus mirabilis HI4320