COG0005


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0005, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Purine nucleoside phosphorylase
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG0005 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2915 FBDBKF_13735 39648 40466 -1 xapA purine-nucleoside phosphorylase Morganella morganii S1
1 group_2915 EHELCC_11405 124524 125342 -1 xapA purine-nucleoside phosphorylase Morganella morganii S2
2 group_2915 NLDBIP_11750 124524 125342 -1 xapA purine-nucleoside phosphorylase Morganella morganii S4
3 group_2915 LHKJJB_11610 124524 125342 -1 xapA purine-nucleoside phosphorylase Morganella morganii S3
4 group_2915 HKOGLL_10220 124524 125342 -1 xapA purine-nucleoside phosphorylase Morganella morganii S5
5 group_2915 F4V73_RS12605 117487 118305 -1 purine-nucleoside phosphorylase Morganella psychrotolerans