COG0003


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0003, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Anion-transporting ATPase, ArsA/GET3 family
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG0003 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3246 FBDBKF_04910 189810 191561 -1 arsA arsenical pump-driving ATPase Morganella morganii S1
1 group_3246 EHELCC_06200 249267 251018 -1 arsA arsenical pump-driving ATPase Morganella morganii S2
2 group_3246 NLDBIP_06520 290332 292083 -1 arsA arsenical pump-driving ATPase Morganella morganii S4
3 group_3246 LHKJJB_03400 267856 269607 -1 arsA arsenical pump-driving ATPase Morganella morganii S3
4 group_3246 HKOGLL_06875 189720 191471 -1 arsA arsenical pump-driving ATPase Morganella morganii S5