merE


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected AMR genes merE, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the AMR genes within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the AMR gene(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported AMR genes has been clustered.
In red the AMR genes with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and AMR genes prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered AMR genes.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or AMR genes prediction.

Description

Gene merE
Description broad-spectrum mercury transporter MerE
Scope plus
Type STRESS
Class MERCURY
Subclass MERCURY
HMM NF010310 

Occurence in the database

merE is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2089 FBDBKF_15700 75158 75394 -1 merE broad-spectrum mercury transporter MerE Morganella morganii S1
1 group_2089 FBDBKF_20215 2157 2393 -1 merE broad-spectrum mercury transporter MerE Morganella morganii S1
2 group_2089 EHELCC_16055 74458 74694 -1 merE broad-spectrum mercury transporter MerE Morganella morganii S2
3 group_2089 EHELCC_19580 2157 2393 -1 merE broad-spectrum mercury transporter MerE Morganella morganii S2
4 group_2089 NLDBIP_16310 5969 6205 1 merE broad-spectrum mercury transporter MerE Morganella morganii S4
5 group_2089 LHKJJB_16490 74458 74694 -1 merE broad-spectrum mercury transporter MerE Morganella morganii S3
6 group_2089 HKOGLL_16260 74458 74694 -1 merE broad-spectrum mercury transporter MerE Morganella morganii S5