Help to interpret the results
The page contains two contents:
General: this table lists the KO entries and their description specific to this pathway, and provides their frequencies in Proteus mirabilis HI4320 and in the whole dataset.
Profile + homologs: the distribution of the Kegg entries of Primary immunodeficiency Kegg pathway is displayed here. Given a Kegg entry and a genome, a red box indicates that one or more loci have been annotated with, while a green box indicates that no locus/loci has(have) been annotated with it, but it/they is/are part of an Orthologous group in which other members have been annotated with that Kegg entry, so it is likely that this copy(ies) also performs this Kegg function.
Check the composition of the Primary immunodeficiency pathway
| KO | Description | #in this genome | All occurrences |
|---|---|---|---|
| K01488 | adenosine deaminase [EC:3.5.4.4] | 1 | 7 |
| K03160 | tumor necrosis factor receptor superfamily member 5 | 0 | 0 |
| K03161 | tumor necrosis factor ligand superfamily member 5 | 0 | 0 |
| K03648 | uracil-DNA glycosylase [EC:3.2.2.27] | 1 | 7 |
| K05070 | interleukin 2 receptor gamma | 0 | 0 |
| K05072 | interleukin 7 receptor | 0 | 0 |
| K05150 | tumor necrosis factor receptor superfamily member 13B | 0 | 0 |
| K05151 | tumor necrosis factor receptor superfamily member 13C | 0 | 0 |
| K05653 | ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:7.4.2.14] | 0 | 0 |
| K05654 | ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:7.4.2.14] | 0 | 0 |
| K05856 | lymphocyte cell-specific protein tyrosine kinase [EC:2.7.10.2] | 0 | 0 |
| K06450 | T-cell surface glycoprotein CD3 delta chain | 0 | 0 |
| K06451 | T-cell surface glycoprotein CD3 epsilon chain | 0 | 0 |
| K06454 | T-cell surface glycoprotein CD4 | 0 | 0 |
| K06458 | T-cell surface glycoprotein CD8 alpha chain | 0 | 0 |
| K06459 | T-cell surface glycoprotein CD8 beta chain | 0 | 0 |
| K06465 | B-lymphocyte antigen CD19 | 0 | 0 |
| K06478 | receptor-type tyrosine-protein phosphatase C [EC:3.1.3.48] | 0 | 0 |
| K06506 | CD79A antigen | 0 | 0 |
| K06554 | immunoglobulin lambda-like polypeptide 1 | 0 | 0 |
| K06713 | inducible T-cell co-stimulator | 0 | 0 |
| K06856 | immunoglobulin heavy chain | 0 | 0 |
| K07210 | inhibitor of nuclear factor kappa-B kinase subunit gamma | 0 | 0 |
| K07360 | tyrosine-protein kinase ZAP-70 [EC:2.7.10.2] | 0 | 0 |
| K07370 | Bruton agammaglobulinemia tyrosine kinase [EC:2.7.10.2] | 0 | 0 |
| K07371 | B-cell linker protein | 0 | 0 |
| K08060 | MHC class II transactivator [EC:2.7.11.1] | 0 | 0 |
| K08061 | regulatory factor X 5 | 0 | 0 |
| K08062 | regulatory factor X-associated ankyrin-containing protein | 0 | 0 |
| K08063 | regulatory factor X-associated protein | 0 | 0 |
| K10603 | autoimmune regulator | 0 | 0 |
| K10628 | V(D)J recombination-activating protein 1 [EC:2.3.2.27] | 0 | 0 |
| K10887 | DNA cross-link repair 1C protein [EC:3.1.-.-] | 0 | 0 |
| K10988 | recombination-activating protein 2 | 0 | 0 |
| K10989 | activation-induced cytidine deaminase [EC:3.5.4.38] | 0 | 0 |
| K11218 | Janus kinase 3 [EC:2.7.10.2] | 0 | 0 |
| K16056 | calcium release-activated calcium channel protein 1 | 0 | 0 |