Antigen processing and presentation
Help to interpret the results
The page contains two contents:
General: this table lists the KO entries and their description specific to this pathway, and provides their frequencies in Morganella morganii S4 and in the whole dataset.
Profile + homologs: the distribution of the Kegg entries of Antigen processing and presentation Kegg pathway is displayed here. Given a Kegg entry and a genome, a red box indicates that one or more loci have been annotated with, while a green box indicates that no locus/loci has(have) been annotated with it, but it/they is/are part of an Orthologous group in which other members have been annotated with that Kegg entry, so it is likely that this copy(ies) also performs this Kegg function.
Check the composition of the Antigen processing and presentation pathway
| KO | Description | #in this genome | All occurrences |
|---|---|---|---|
| K01363 | cathepsin B [EC:3.4.22.1] | 0 | 0 |
| K01365 | cathepsin L [EC:3.4.22.15] | 0 | 0 |
| K01368 | cathepsin S [EC:3.4.22.27] | 0 | 0 |
| K01369 | legumain [EC:3.4.22.34] | 0 | 0 |
| K03156 | tumor necrosis factor superfamily, member 2 | 0 | 0 |
| K03283 | heat shock 70kDa protein 1/6/8 | 0 | 0 |
| K04079 | molecular chaperone HtpG | 1 | 7 |
| K04687 | interferon gamma | 0 | 0 |
| K05653 | ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:7.4.2.14] | 0 | 0 |
| K05654 | ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:7.4.2.14] | 0 | 0 |
| K05870 | cyclic AMP-responsive element-binding protein 1 | 0 | 0 |
| K06454 | T-cell surface glycoprotein CD4 | 0 | 0 |
| K06458 | T-cell surface glycoprotein CD8 alpha chain | 0 | 0 |
| K06459 | T-cell surface glycoprotein CD8 beta chain | 0 | 0 |
| K06505 | CD74 antigen | 0 | 0 |
| K06516 | killer cell lectin-like receptor subfamily D member 1 | 0 | 0 |
| K06541 | killer cell lectin-like receptor subfamily C1 | 0 | 0 |
| K06696 | proteasome activator subunit 1 (PA28 alpha) | 0 | 0 |
| K06697 | proteasome activator subunit 2 (PA28 beta) | 0 | 0 |
| K06698 | proteasome activator subunit 3 (PA28 gamma) | 0 | 0 |
| K06751 | MHC class I antigen | 0 | 0 |
| K06752 | MHC class II antigen | 0 | 0 |
| K07980 | killer cell immunoglobulin-like receptor 3DL | 0 | 0 |
| K07981 | killer cell immunoglobulin-like receptor 2DL1/2/3 | 0 | 0 |
| K07982 | killer cell immunoglobulin-like receptor 2DS | 0 | 0 |
| K08054 | calnexin | 0 | 0 |
| K08055 | beta-2-microglobulin | 0 | 0 |
| K08056 | protein disulfide-isomerase A3 [EC:5.3.4.1] | 0 | 0 |
| K08057 | calreticulin | 0 | 0 |
| K08058 | TAP binding protein (tapasin) | 0 | 0 |
| K08059 | interferon, gamma-inducible protein 30 | 0 | 0 |
| K08060 | MHC class II transactivator [EC:2.7.11.1] | 0 | 0 |
| K08061 | regulatory factor X 5 | 0 | 0 |
| K08062 | regulatory factor X-associated ankyrin-containing protein | 0 | 0 |
| K08063 | regulatory factor X-associated protein | 0 | 0 |
| K08064 | nuclear transcription factor Y, alpha | 0 | 0 |
| K08065 | nuclear transcription Y subunit beta | 0 | 0 |
| K08066 | nuclear transcription factor Y, gamma | 0 | 0 |
| K09489 | heat shock 70kDa protein 4 | 0 | 0 |
| K09490 | endoplasmic reticulum chaperone BiP [EC:3.6.4.10] | 0 | 0 |
| K10784 | T cell receptor alpha chain V region | 0 | 0 |
| K10785 | T-cell receptor beta chain V region | 0 | 0 |
| K24231 | killer cell immunoglobulin-like receptor 2DL4 | 0 | 0 |
| K24232 | killer cell immunoglobulin-like receptor 2DL5 | 0 | 0 |
| K24233 | killer cell lectin-like receptor subfamily C2/3 | 0 | 0 |
| K24234 | killer cell lectin-like receptor subfamily C4 | 0 | 0 |
| K26598 | heat shock 70kDa protein 2 | 0 | 0 |