Help to interpret the results
The page contains two contents:
General: this table lists the KO entries and their description specific to this pathway, and provides their frequencies in Morganella psychrotolerans and in the whole dataset.
Profile + homologs: the distribution of the Kegg entries of Viral life cycle - HIV-1 Kegg pathway is displayed here. Given a Kegg entry and a genome, a red box indicates that one or more loci have been annotated with, while a green box indicates that no locus/loci has(have) been annotated with it, but it/they is/are part of an Orthologous group in which other members have been annotated with that Kegg entry, so it is likely that this copy(ies) also performs this Kegg function.
Check the composition of the Viral life cycle - HIV-1 pathway
| KO | Description | #in this genome | All occurrences |
|---|---|---|---|
| K01349 | furin [EC:3.4.21.75] | 0 | 0 |
| K02211 | cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] | 0 | 0 |
| K03767 | peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] | 1 | 7 |
| K04180 | C-C chemokine receptor type 5 | 0 | 0 |
| K04189 | C-X-C chemokine receptor type 4 | 0 | 0 |
| K04498 | E1A/CREB-binding protein [EC:2.3.1.48] | 0 | 0 |
| K06062 | histone acetyltransferase [EC:2.3.1.48] | 0 | 0 |
| K06454 | T-cell surface glycoprotein CD4 | 0 | 0 |
| K06731 | bone marrow stromal cell antigen 2 | 0 | 0 |
| K07936 | GTP-binding nuclear protein Ran | 0 | 0 |
| K09578 | peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] | 0 | 0 |
| K10429 | microtubule-associated protein 1 | 0 | 0 |
| K10648 | tripartite motif-containing protein 5 [EC:2.3.2.27] | 0 | 0 |
| K11648 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 | 0 | 0 |
| K12172 | E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] | 0 | 0 |
| K12182 | hepatocyte growth factor-regulated tyrosine kinase substrate | 0 | 0 |
| K12183 | ESCRT-I complex subunit TSG101 | 0 | 0 |
| K12194 | charged multivesicular body protein 4A/B | 0 | 0 |
| K12195 | charged multivesicular body protein 6 | 0 | 0 |
| K12196 | vacuolar protein-sorting-associated protein 4 | 0 | 0 |
| K12200 | programmed cell death 6-interacting protein | 0 | 0 |
| K14290 | exportin-1 | 0 | 0 |
| K14296 | nuclear pore complex protein Nup153 | 0 | 0 |
| K14398 | cleavage and polyadenylation specificity factor subunit 6/7 | 0 | 0 |
| K14754 | interferon-induced GTP-binding protein Mx | 0 | 0 |
| K15171 | transcription elongation factor SPT4 | 0 | 0 |
| K15172 | transcription elongation factor SPT5 | 0 | 0 |
| K15179 | negative elongation factor A | 0 | 0 |
| K15180 | negative elongation factor B | 0 | 0 |
| K15181 | negative elongation factor C/D | 0 | 0 |
| K15182 | negative elongation factor E | 0 | 0 |
| K15183 | RNA polymerase II elongation factor ELL | 0 | 0 |
| K15185 | AF4/FMR2 family member 4 | 0 | 0 |
| K15187 | YEATS domain-containing protein 1/3 | 0 | 0 |
| K15188 | cyclin T | 0 | 0 |
| K15436 | transportin-3 | 0 | 0 |
| K18739 | protein bicaudal D | 0 | 0 |
| K18750 | C->U-editing enzyme APOBEC3 [EC:3.5.4.-] | 0 | 0 |
| K19258 | HIV protein Tat | 0 | 0 |
| K19287 | HIV envelope glycoprotein gp160 | 0 | 0 |
| K22202 | HIV virus protein R | 0 | 0 |
| K22544 | deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] | 0 | 0 |
| K22599 | HIV protease [EC:3.4.23.16 3.4.23.47] | 0 | 0 |
| K22890 | HIV-1 protein Vpu | 0 | 0 |
| K22891 | HIV protein Nef | 0 | 0 |
| K22892 | HIV virion infectivity factor | 0 | 0 |
| K22951 | HIV Gag or Gag-Pol polyprotein | 0 | 0 |
| K24266 | HIV envelope glycoprotein gp120 | 0 | 0 |
| K24801 | HIV transmembrane fusion protein gp41 | 0 | 0 |
| K24802 | HIV-1 reverse transcriptase / ribonuclease H [EC:2.7.7.49 2.7.7.7 3.1.26.13] | 0 | 0 |
| K24803 | HIV-1 integrase | 0 | 0 |
| K25057 | PC4 and SFRS1-interacting protein | 0 | 0 |
| K25306 | HIV capsid protein | 0 | 0 |
| K25655 | serine incorporator 5 | 0 | 0 |
| K25661 | serine incorporator 3 | 0 | 0 |
| K25663 | fasciculation and elongation protein zeta-1 | 0 | 0 |
| K25664 | HIV-1 nucleocapsid protein | 0 | 0 |
| K25665 | HIV protein Rev | 0 | 0 |
| K25666 | HIV-1 matrix protein | 0 | 0 |
| K25667 | HIV-1 p6-gag | 0 | 0 |