Ribosome biogenesis in eukaryotes
Help to interpret the results
The page contains two contents:
General: this table lists the KO entries and their description specific to this pathway, and provides their frequencies in Morganella morganii S4 and in the whole dataset.
Profile + homologs: the distribution of the Kegg entries of Ribosome biogenesis in eukaryotes Kegg pathway is displayed here. Given a Kegg entry and a genome, a red box indicates that one or more loci have been annotated with, while a green box indicates that no locus/loci has(have) been annotated with it, but it/they is/are part of an Orthologous group in which other members have been annotated with that Kegg entry, so it is likely that this copy(ies) also performs this Kegg function.
Check the composition of the Ribosome biogenesis in eukaryotes pathway
| KO | Description | #in this genome | All occurrences |
|---|---|---|---|
| K01164 | ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] | 0 | 0 |
| K01979 | small subunit 18S ribosomal RNA | 0 | 0 |
| K01981 | large subunit 5S ribosomal RNA | 0 | 0 |
| K01982 | large subunit 28S/25S ribosomal RNA | 0 | 0 |
| K01986 | large subunit 5.8S ribosomal RNA | 0 | 0 |
| K03097 | casein kinase II subunit alpha [EC:2.7.11.1] | 0 | 0 |
| K03115 | casein kinase II subunit beta | 0 | 0 |
| K03264 | translation initiation factor 6 | 0 | 0 |
| K03537 | ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] | 0 | 0 |
| K03538 | ribonuclease P protein subunit POP4 [EC:3.1.26.5] | 0 | 0 |
| K03539 | ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] | 0 | 0 |
| K03685 | ribonuclease III [EC:3.1.26.3] | 1 | 7 |
| K06943 | nucleolar GTP-binding protein | 0 | 0 |
| K07178 | RIO kinase 1 [EC:2.7.11.1] | 0 | 0 |
| K07179 | RIO kinase 2 [EC:2.7.11.1] | 0 | 0 |
| K07562 | 60S ribosomal export protein NMD3 | 0 | 0 |
| K07936 | GTP-binding nuclear protein Ran | 0 | 0 |
| K11108 | RNA 3'-terminal phosphate cyclase-like protein | 0 | 0 |
| K11128 | H/ACA ribonucleoprotein complex subunit 1 | 0 | 0 |
| K11129 | H/ACA ribonucleoprotein complex subunit 2 | 0 | 0 |
| K11130 | H/ACA ribonucleoprotein complex subunit 3 | 0 | 0 |
| K11131 | H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] | 0 | 0 |
| K11883 | RNA-binding protein NOB1 | 0 | 0 |
| K12618 | 5'-3' exoribonuclease 1 [EC:3.1.13.-] | 0 | 0 |
| K12619 | 5'-3' exoribonuclease 2 [EC:3.1.13.-] | 0 | 0 |
| K12845 | U4/U6 small nuclear ribonucleoprotein SNU13 | 0 | 0 |
| K13288 | oligoribonuclease [EC:3.1.-.-] | 1 | 7 |
| K14284 | nuclear RNA export factor | 0 | 0 |
| K14285 | NTF2-related export protein 1/2 | 0 | 0 |
| K14290 | exportin-1 | 0 | 0 |
| K14483 | small nucleolar RNA SNORD3 | 0 | 0 |
| K14521 | N-acetyltransferase 10 [EC:2.3.1.-] | 0 | 0 |
| K14522 | ribonuclease P/MRP protein subunit POP3 [EC:3.1.26.5] | 0 | 0 |
| K14523 | ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5] | 0 | 0 |
| K14524 | ribonuclease P/MRP protein subunit POP6 [EC:3.1.26.5] | 0 | 0 |
| K14525 | ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] | 0 | 0 |
| K14526 | ribonuclease P/MRP protein subunit POP7 [EC:3.1.26.5] | 0 | 0 |
| K14527 | ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5] | 0 | 0 |
| K14528 | ribonuclease P/MRP protein subunit POP8 [EC:3.1.26.5] | 0 | 0 |
| K14530 | ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] | 0 | 0 |
| K14531 | ribonuclease MRP protein subunit SNM1 | 0 | 0 |
| K14532 | ribonuclease MRP protein subunit RMP1 | 0 | 0 |
| K14536 | ribosome assembly protein 1 [EC:3.6.5.-] | 0 | 0 |
| K14537 | nuclear GTP-binding protein | 0 | 0 |
| K14538 | nuclear GTP-binding protein | 0 | 0 |
| K14539 | large subunit GTPase 1 [EC:3.6.1.-] | 0 | 0 |
| K14543 | mRNA transport regulator MTR2 | 0 | 0 |
| K14544 | U3 small nucleolar RNA-associated protein 22 | 0 | 0 |
| K14545 | ribosomal RNA-processing protein 7 | 0 | 0 |
| K14546 | U3 small nucleolar RNA-associated protein 5 | 0 | 0 |
| K14547 | U3 small nucleolar RNA-associated protein 8 | 0 | 0 |
| K14548 | U3 small nucleolar RNA-associated protein 4 | 0 | 0 |
| K14549 | U3 small nucleolar RNA-associated protein 15 | 0 | 0 |
| K14550 | U3 small nucleolar RNA-associated protein 10 | 0 | 0 |
| K14551 | U3 small nucleolar RNA-associated protein 9 | 0 | 0 |
| K14552 | NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) | 0 | 0 |
| K14553 | U3 small nucleolar RNA-associated protein 18 | 0 | 0 |
| K14554 | U3 small nucleolar RNA-associated protein 21 | 0 | 0 |
| K14555 | U3 small nucleolar RNA-associated protein 13 | 0 | 0 |
| K14556 | U3 small nucleolar RNA-associated protein 12 | 0 | 0 |
| K14557 | U3 small nucleolar RNA-associated protein 6 | 0 | 0 |
| K14558 | periodic tryptophan protein 2 | 0 | 0 |
| K14559 | U3 small nucleolar RNA-associated protein MPP10 | 0 | 0 |
| K14560 | U3 small nucleolar ribonucleoprotein protein IMP3 | 0 | 0 |
| K14561 | U3 small nucleolar ribonucleoprotein protein IMP4 | 0 | 0 |
| K14562 | Treacher Collins syndrome protein | 0 | 0 |
| K14563 | rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] | 0 | 0 |
| K14564 | nucleolar protein 56 | 0 | 0 |
| K14565 | nucleolar protein 58 | 0 | 0 |
| K14566 | U3 small nucleolar RNA-associated protein 24 | 0 | 0 |
| K14567 | U3 small nucleolar RNA-associated protein 14 | 0 | 0 |
| K14568 | rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] | 0 | 0 |
| K14569 | ribosome biogenesis protein BMS1 | 0 | 0 |
| K14570 | RNA exonuclease [EC:3.1.-.-] | 0 | 0 |
| K14571 | ribosome biogenesis ATPase | 0 | 0 |
| K14572 | midasin | 0 | 0 |
| K14573 | nucleolar protein 4 | 0 | 0 |
| K14574 | ribosome maturation protein SDO1 | 0 | 0 |
| K14575 | AAA family ATPase | 0 | 0 |
| K14576 | small nucleolar RNA MRP | 0 | 0 |
| K14758 | casein kinase I homolog HRR25 [EC:2.7.11.1] | 0 | 0 |
| K18532 | adenylate kinase [EC:2.7.4.3] | 0 | 0 |
| K26477 | small nucleolar RNA MRP | 0 | 0 |